<a href="http://www.ccb.jhu.edu/people/jennifer.lu/">Jennifer Lu</a> joins me to discuss species abundance estimation from metagenomic sequencing data.

 

 
 Links:

<ul>
 <li><a href="https://peerj.com/articles/cs-104/">The Bracken paper</a></li>
 <li><a href="https://peerj.com/articles/cs-104/">The Kraken paper</a></li>
 <li><a href="https://arxiv.org/abs/1510.07371">The preprint that applies Kallisto to metagenomics</a></li>
</ul>

 

 
 If you enjoyed this episode, please consider supporting the podcast on <a href="https://www.patreon.com/bioinfochat">Patreon</a>.

Jennifer Lu joins me to discuss species abundance estimation from metagenomic sequencing data. Links: The Bracken paper The Kraken paper The preprint that applies Kallisto to metagenomics If you enjoyed this episode, please consider supporting the podcast on Patreon.

<a href="http://www.ccb.jhu.edu/people/jennifer.lu/" rel="noopener noreferrer">Jennifer Lu</a> joins me to discuss species abundance estimation from metagenomic sequencing data.

 

 
 Links:

<ul>
 <li><a href="https://peerj.com/articles/cs-104/" rel="noopener noreferrer">The Bracken paper</a></li>
 <li><a href="https://peerj.com/articles/cs-104/" rel="noopener noreferrer">The Kraken paper</a></li>
 <li><a href="https://arxiv.org/abs/1510.07371" rel="noopener noreferrer">The preprint that applies Kallisto to metagenomics</a></li>
</ul>

 

 
 If you enjoyed this episode, please consider supporting the podcast on <a href="https://www.patreon.com/bioinfochat" rel="noopener noreferrer">Patreon</a>.

#13 Bracken with Jennifer Lu

A podcast about computational biology, bioinformatics, and next generation sequencing.

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#13 Bracken with Jennifer Lu

#13 Bracken with Jennifer Lu