the bioinformatics chat

#15 Optimal transport for single-cell expression data with Geoffrey Schiebinger

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Geoffrey Schiebinger explains

how reconstructing developmental trajectories from single-cell RNA-seq data can be reduced to the
mathematical problem called optimal transport.

Links:

  • Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming.
  • Talk by Geoffrey and Lénaïc Chizat

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