In this episode, <a href="https://www.systemsbiology.org/bio/gustavo-glusman-phd/">Gustavo Glusman</a> explains his method of reducing a VCF file
to a small “fingerprint”, which could be then used to detect duplicate genomes,
infer relatedness, map the population structure, and more.


 

 
 Links:

<ul>
 <li><a href="https://www.frontiersin.org/articles/10.3389/fgene.2017.00136/full">The genome fingerprints paper</a></li>
 <li><a href="https://www.biorxiv.org/content/early/2017/10/27/208025">The genotype fingerprints preprint</a></li>
 <li><a href="https://www.biorxiv.org/content/early/2018/04/02/293183">The data fingerprints preprint</a></li>
 <li><a href="https://districtdatalabs.silvrback.com/time-maps-visualizing-discrete-events-across-many-timescales">The blog post about time series visualization</a></li>
</ul>

In this episode, Gustavo Glusman explains his method of reducing a VCF file to a small “fingerprint”, which could be then used to detect duplicate genomes, infer relatedness, map the population structure, and more. Links: The genome fingerprints paper The genotype fingerprints preprint The data fingerprints preprint The blog post about time series visualization

In this episode, <a href="https://www.systemsbiology.org/bio/gustavo-glusman-phd/" rel="noopener noreferrer">Gustavo Glusman</a> explains his method of reducing a VCF file
to a small “fingerprint”, which could be then used to detect duplicate genomes,
infer relatedness, map the population structure, and more.


 

 
 Links:

<ul>
 <li><a href="https://www.frontiersin.org/articles/10.3389/fgene.2017.00136/full" rel="noopener noreferrer">The genome fingerprints paper</a></li>
 <li><a href="https://www.biorxiv.org/content/early/2017/10/27/208025" rel="noopener noreferrer">The genotype fingerprints preprint</a></li>
 <li><a href="https://www.biorxiv.org/content/early/2018/04/02/293183" rel="noopener noreferrer">The data fingerprints preprint</a></li>
 <li><a href="https://districtdatalabs.silvrback.com/time-maps-visualizing-discrete-events-across-many-timescales" rel="noopener noreferrer">The blog post about time series visualization</a></li>
</ul>

#19 Genome fingerprints with Gustavo Glusman

A podcast about computational biology, bioinformatics, and next generation sequencing.

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#19 Genome fingerprints with Gustavo Glusman

#19 Genome fingerprints with Gustavo Glusman