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24.11.2025: Flexible Molecular Ensembles, Protein Design with Diffusion Models, and Fingerprint Hash Effects
This podcast is brought to you by the Oliver Laboratory at Vanderbilt University.
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0:00 Joint Design of Protein Surface and Structure Using a Diffusion Bridge Model (https://arxiv.org/pdf/2511.16675.pdf)
4:24 Hash Collisions in Molecular Fingerprints: Effects on Property Prediction and Bayesian Optimization (https://arxiv.org/pdf/2511.17078.pdf)
8:33 FlexiFlow: decomposable flow matching for generation of flexible molecular ensemble (https://arxiv.org/pdf/2511.17249.pdf)
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Source code: https://github.com/OliverLaboratory/arxivreader
Contact: oliverlaboratory.com
Source code: https://github.com/OliverLaboratory/arxivreader
View all episodes
By This podcast is brought to you by the Oliver Laboratory at Vanderbilt University.
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0:00 Joint Design of Protein Surface and Structure Using a Diffusion Bridge Model (https://arxiv.org/pdf/2511.16675.pdf)
4:24 Hash Collisions in Molecular Fingerprints: Effects on Property Prediction and Bayesian Optimization (https://arxiv.org/pdf/2511.17078.pdf)
8:33 FlexiFlow: decomposable flow matching for generation of flexible molecular ensemble (https://arxiv.org/pdf/2511.17249.pdf)
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Source code: https://github.com/OliverLaboratory/arxivreader
Contact: oliverlaboratory.com
Source code: https://github.com/OliverLaboratory/arxivreader