This article "A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses" is published in Molecular Ecology Resources.

Author: Ali Hakimzadeh

Journal: Molecular Ecology Resources

Year: 2024

Podcast type: Short

The authors are:

⦁ Ali Hakimzadeh

⦁ Alejandro Abdala Asbun

⦁ Davide Albanese

⦁ Maria Bernard

⦁ Dominik Buchner

⦁ Benjamin Callahan

⦁ J. Gregory Caporaso

⦁ Emily Curd

⦁ Christophe Djemiel

⦁ Mikael Brandström Durling

⦁ Vasco Elbrecht

⦁ Zachary Gold

⦁ Hyun S. Gweon

⦁ Mehrdad Hajibabaei

⦁ Falk Hildebrand

⦁ Vladimir Mikryukov

⦁ Eric Normandeau

⦁ Ezgi Özkurt

⦁ Jonathan M. Palmer

⦁ Géraldine Pascal

⦁ Teresita M. Porter

⦁ Daniel Straub

⦁ Martti Vasar

⦁ Tomáš Větrovský

⦁ Haris Zafeiropoulos

⦁ Sten Anslan

Affiliations:

Ali Hakimzadeh — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Alejandro Abdala Asbun — Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands

Davide Albanese — Unit of Computational Biology, Research and Innovation Centre, Fondazione Edmund Mach, Italy

Maria Bernard — INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, France; INRAE, SIGENAE, Jouy-en-Josas, France

Dominik Buchner ,Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany

Benjamin Callahan, Department of Population Health and Pathobiology, College of Veterinary Medicine and Bioinformatics Research Center, North Carolina State University, Raleigh, North Carolina, USA

J. Gregory Caporaso, Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA

Emily Curd, Vermont Biomedical Research Network, University of Vermont, Burlington, Vermont, USA

Christophe Djemiel, Agroécologie, INRAE, Institut Agro, Univ. Bourgogne Franche-Comté, Dijon, France

Mikael Brandström Durling, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden

Vasco Elbrecht — Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany

Zachary Gold — NOAA Pacific Marine Environmental Laboratory, Seattle, Washington, USA

Hyun S. Gweon — UK Centre for Ecology & Hydrology, Oxfordshire, UK; School of Biological Sciences, University of Reading, Reading, UK

Mehrdad Hajibabaei — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada

Falk Hildebrand — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK

Vladimir Mikryukov — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Eric Normandeau — Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada

Ezgi Özkurt — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK

Jonathan M. Palmer — Center for Forest Mycology Research, Northern Research Station, US Forest Service, Madison, Wisconsin, USA

Géraldine Pascal — GenPhySE, Université de Toulouse, INRAE, ENVT, Castanet Tolosan, France

Teresita M. Porter — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada

Daniel Straub — Quantitative Biology Center (QBiC), University of Tübingen, Tübingen, Germany

Martti Vasar — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Tomáš Větrovský — Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Praha, Czech Republic

Haris Zafeiropoulos — KU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Laboratory of Molecular Bacteriology, Leuven, Belgium

Sten Anslan — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia; Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland