Physik - Open Access LMU - Teil 02/02

Conformational control of benzophenone-sensitized charge transfer in dinucleotides


Listen Later

Charge transfer in DNA cannot be understood without addressing the complex conformational flexibility, which occurs on a wide range of timescales. In order to reduce this complexity four dinucleotide models 1X consisting of benzophenone linked by a phosphodiester to one of the natural nucleosides X = A, G, T, C were studied in water and methanol. The theoretical work focuses on the dynamics and electronic structure of 1G. Predominant conformations in the two solvents were obtained by molecular dynamics simulations. 1G in MeOH adopts mainly an open geometry with a distance of 12-16 angstrom between the two aromatic parts. In H2O the two parts of 1G form primarily a stacked conformation yielding a distance of 5-6 angstrom. The low-lying excited states were investigated by electronic structure theory in a QM/MM environment for representative snapshots of the trajectories. Photo-induced intramolecular charge transfer in the S-1 state occurs exclusively in the stacked conformation. Ultrafast transient absorption spectroscopy with 1X reveals fast charge transfer from S-1 in both solvents with varying yields. Significant charge transfer from the T-1 state is only found for the nucleobases with the lowest oxidation potential: in H2O, charge transfer occurs with 3.2 x 10(9) s(-1) for 1A and 6.0 x 10(9) s(-1) for 1G. The reorganization energy remains nearly unchanged going from MeOH to the more polar H2O. The electronic coupling is rather low even for the stacked conformation with H-AB = 3 meV and explains the moderate charge transfer rates. The solvent controls the conformational distribution and therefore gates the charge transfer due to differences in distance and stacking.
...more
View all episodesView all episodes
Download on the App Store

Physik - Open Access LMU - Teil 02/02By Ludwig-Maximilians-Universität München


More shows like Physik - Open Access LMU - Teil 02/02

View all
Tonspur Forschung by Annik Rubens

Tonspur Forschung

3 Listeners

Einführung in die Ethnologie by Prof. Dr. Frank Heidemann

Einführung in die Ethnologie

0 Listeners

Theoretical Physics Schools (ASC) by The Arnold Sommerfeld Center for Theoretical Physics (ASC)

Theoretical Physics Schools (ASC)

2 Listeners

MCMP – Mathematical Philosophy (Archive 2011/12) by MCMP Team

MCMP – Mathematical Philosophy (Archive 2011/12)

6 Listeners

Hegel lectures by Robert Brandom, LMU Munich by Robert Brandom, Axel Hutter

Hegel lectures by Robert Brandom, LMU Munich

6 Listeners

MCMP – Metaphysics and Philosophy of Language by MCMP Team

MCMP – Metaphysics and Philosophy of Language

2 Listeners

MCMP – Philosophy of Science by MCMP Team

MCMP – Philosophy of Science

1 Listeners

Sommerfeld Lecture Series (ASC) by The Arnold Sommerfeld Center for Theoretical Physics (ASC)

Sommerfeld Lecture Series (ASC)

0 Listeners

MCMP by MCMP Team

MCMP

2 Listeners

Women Thinkers in Antiquity and the Middle Ages - SD by Peter Adamson

Women Thinkers in Antiquity and the Middle Ages - SD

0 Listeners