Science Research Weekly

Episode 13: Funny-Looking Bioinformatics

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In this episode, I broadened up my bioinformatics background, found that the latest R-release was a Funny-Looking Kid, and extracted lobster species using package ‘OpenTreeChronograms’. 

References:

  • A New Tobit Ridge-Type Estimator of the Censored Regression Model with Multicollinearity Problem
  • Selecting predictive biomarkers from genomic data
  • COBREXA.jl: constraint-based reconstruction and exascale analysis
  • Partial leverage plots
  • R 4.2.1 is released
  • {CIPerm}: Computationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods
  • When Linear Models Don’t Fit Your Data, Now What?
  • SVG to PNG
  • How to Find Unmatched Records in R
  • Create new variables from existing variables in R

    • R-packages:

    • OpenTreeChronograms: Open Tree of Life Chronograms
    • phacking: Sensitivity Analysis for p-Hacking in Meta-Analyses
    • RCTS: Clustering Time Series While Resisting Outliers
    • MakeYourPalette: Make Your Palette
    • ontologics: Code-Logics to Handle Ontologies
    • CIPerm: Computationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods
      • ...more
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      Science Research WeeklyBy Mark R Williamson