PaperPlayer biorxiv genomics

Genomic investigation of a suspected multi-drug resistant Klebsiella pneumoniae outbreak in a neonatal care unit in sub-Saharan Africa


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Link to bioRxiv paper:
http://biorxiv.org/cgi/content/short/2020.08.06.236117v1?rss=1
Authors: Cornick, J. E., Musicha, P., Peno, C., Saeger, E., Iroh-Tam, P.-Y., Bennett, A., Kennedy, N., Feasey, N., Heniz, E., Cain, A. K.
Abstract:
A suspected outbreak of multi-drug resistant (MDR) Klebsiella pneumoniae in a Malawian neonatal unit was investigated using whole-genome sequencing. Strain-types, virulence and resistance genes of K. pneumoniae isolated from patients in the hospital over a four-year period were identified. A MDR ST340 clone was implicated as the likely outbreak cause.
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