Science Research Weekly

Millions of Peptides, Billions of Rows (Season 3: Episode 23)

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Get ready for rival to PRC, a massive antimicrobial peptide catalog, the One Billon Row Challenge in R, and custom color palettes for ggplot. Science On.


References:

  • AMPLON: Amplifying DNA with Multiarm Priming and Looping Optimization of Nucleic Acid
  • Discovery of antimicrobial peptides in the global microbiome with machine learning
  • Journal of Statistical Software Volume 109
  • R One Billion Row Challenge: Is R Viable Option for Analyzing Huge Datasets?
  • Simple custom colour palettes with R ggplot graphs
  • RStudio Shortcuts and Settings


    • R Packages:

    • ggarrow: Arrows for 'ggplot2'
    • pastaPlot: Spaghetti-Plot Fixed and Random Effects of Linear Mixed Models
    • codewhere: Find the Location of an R Package's Code
      • ...more
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      Science Research WeeklyBy Mark R Williamson