ATAC-seq is a powerful technique for assessing chromatin accessibility and identifying regulatory regions across the genome. From bulk ATAC-seq for population-level findings to single-cell ATAC-seq (scATAC-seq) to resolve chromatin accessibility at the individual cell level, these approaches lend deeper insights into gene regulation and cell state.

QIAGEN CLC Genomics Workbench Premium provides researchers with a single, flexible platform for the analysis of both bulk ATAC-seq and scATAC-seq data. In this webinar, we’ll showcase the Workbench’s ATAC-seq analysis workflows, such as:

• Data processing and QC, including read quality control, deduplication and comprehensive reporting

• Core analysis steps, including peak calling, nearby gene identification and transcription factor motif analysis

• Biological interpretation and visualization, including clustering, automated cell type prediction for single-cell data and visualizations (UMAP plots, dot plots, heat maps and violin plots)