In Season 3, Episode 5 DISCO finally makes its to Star Fleet/Federation Headquarters... And everyone is very suspicious of them. The powers that be want to split up the crew and maybe even the ship (DUN DUN DUN!)

 

Captain Saru and First Officer Michael Burnham must race to prove their worth to this advanced Federation and keep the crew (and ship) together — but the future is a very strange place and sacrifices must be made...