Data Science Deployed

This week we talk about linked data, how to get started with it, and how it is currently being used.

Donny's Linked Data GitHub Repo and Course - https://github.com/polyneme/intro-linkeddata-mongo-python

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Follow the podcast on Twitter: @dsdeployed

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Donny Winston

I help researchers do data-intensive science together.

Ben Cook

Twitter: ​​@jbencook https://twitter.com/jbencook

Jillian Rowe

Email: [email protected] 

This week we talk about computer vision annotation platforms in general and Label studio in particular!

Label studio: https://labelstud.io/

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Follow the podcast on Twitter: @dsdeployed

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Donny Winston

I help researchers do data-intensive science together.

Ben Cook

Twitter: ​​@jbencook https://twitter.com/jbencook

Jillian Rowe

Email: [email protected] 

This week we're talking about Python Package management with Poetry along with general data versioning and software stack management tips, tricks, and complaints.

Ben started us off with an article he wrote introducing Poetry - https://sparrow.dev/python-poetry-machine-learning/

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Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

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Donny Winston

I help researchers do data-intensive science together.

Twitter: https://twitter.com/donnywinston @donnywinston

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

Today we talk about Data Versioning. Why you should do it, what to do about humans in the loop, and how to minimize mistakes. 

Tools mentioned:

DVC - https://dvc.org/

Quilt Data Versioning - https://quiltdata.com/

Apache Airflow - https://airflow.apache.org/

Apache Superset - https://superset.apache.org/

OpenProject - https://www.openproject.org/

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Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

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Donny Winston

I help researchers do data-intensive science together.

Twitter: https://twitter.com/donnywinston @donnywinston

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

This week we discuss Pangeo, how they structured their project from infrastructure to data science, and how that can inform other projects.

And see the showcase: https://pangeo.io/pangeo-showcase.html#pangeo-showcase

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Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

----------------------------------------

Donny Winston

I help researchers do data-intensive science together.

Twitter: https://twitter.com/donnywinston @donnywinston

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

We're talking with Greg this week about the peopling around data science. He brings up tons of excellent points. 

You can find out more about Greg on Twitter: https://twitter.com/gvwilson 

https://github.com/gvwilson/12-design

https://merely-useful.tech/py-rse/

https://www.amazon.com/Fearless-Change-Patterns-Introducing-paperback/dp/0134395255

https://www.amazon.com/dp/B0051HSJBE/ref=dp-kindle-redirect?_encoding=UTF8&btkr=1

https://www.amazon.com/Discussion-Book-Great-People-Talking/dp/1119049717

https://producingoss.com/

https://codebender.org/

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Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

----------------------------------------

Donny Winston

I help researchers do data-intensive science together.

Twitter: https://twitter.com/donnywinston @donnywinston

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

Co-Host Ben Cooks discusses his work around deploying Machine Learning models, and how you can make sure you are set up for success before you ever start writing code.

Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

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Donny Winston

I help researchers do data-intensive science together.

Twitter: https://twitter.com/donnywinston @donnywinston

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

BioDeploy: https://github.com/dabble-of-devops-biodeploy

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

This week we talk to cohost Jillian Rowe, an independent consultant for Bioinformatics. She is currently developing BioDeploy, a science-first approach to deploy High-Performance Compute Infrastructure on AWS. 

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Follow the podcast on Twitter: @dsdeployed

https://twitter.com/dsdeployed

----------------------------------------

Donny Winston

I help researchers do data-intensive science together.

Email: [email protected]

Website: https://polyneme.xyz/

LinkedIn: https://www.linkedin.com/in/donnywinston/

Ben Cook

I help data science teams deploy their algorithms because a machine learning model is only as good as the system that delivers it.

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn: https://www.linkedin.com/in/jbencook/

Email: [email protected]

Website: https://sparrow.dev/

Jillian Rowe

I help biotech startups deploy scalable high performance compute infrastructure on AWS.

Email: [email protected] 

Website: https://www.dabbleofdevops.com

Twitter: www.twitter.com/jillianerowe

LinkedIn: https://www.linkedin.com/in/jillian-rowe-9410437a/

Donny talks about the Materials Project.

You can find out more here

Contact the Hosts for Consulting:

Jillian

[email protected] 

https://www.dabbleofdevops.com

Twitter: @jillianerowe https://twitter.com/jillianerowe

LinkedIn

Ben Cook

Twitter: ​​@jbencook https://twitter.com/jbencook

LinkedIn

Email: [email protected]

Donny Winston

[email protected]

 Website

 LinkedIn

 Website