Kate Baker talks AMR

Someone asks a simple question like "What programming language should I learn?", without realising just how difficult it is to answer. We discuss different programming languages and their use in Bioinformatics.

12 Phylogenetics with the arborists part 2 by Microbial Bioinformatics

11 Phylogenetics with the arborists part 1 by Microbial Bioinformatics

10 History of file formats by Microbial Bioinformatics

Have you made a nobel prize winning discovery, or are you just looking at contamination. We discuss common sources of contamination in genome sequencing, covering both short and long reads.

So it's the end of 2019 and we thought we'd like to pause and look back at what we were working on . What resonated with us and where we think the micro binfie field will go in the new year.

This episode we discuss the ubiquitous Sequence Alignment Map (SAM)format

Torsten Seemann joins us to discuss how to write good bioinformatics software. Torsten is the author of many popular bioinformatics tools such as Prokka, Snippy, Barrnap, Abricate, Shovill, and Nullarbor.

Links:

https://github.com/tseemann

Modern genotyping is discussed in this second part.