ReSay

This article "Long-read sequencing for identification of insertion sites in large transposon mutant libraries" is published in Scientific Reports.

Author:Muhammad Yasir

Journal:Scientific Reports

Year:2022

Podcast type:Expert

The authors are Muhammad Yasir, 

• A. Keith Turner, 
• Martin Lott, 
• Steven Rudder, 
• David Baker, 
• Sarah Bastkowski, 
• Andrew J. Page, 
• Mark A. Webber & 
• Ian G. Charles 

Affiliations:

1Quadram Institute Bioscience, Rosalind Franklin Road, Norwich NR4 7UQ, UK. 2Norwich Medical School,

Norwich Research Park, Colney Lane, Norwich NR4 7TJ, UK. 3University of East Anglia, Norwich Research Park,

Norwich NR4 7TJ, UK. *email: [email protected]

This article "Genome-wide analysis of genes involved in efflux function and regulation within Escherichia coli and Salmonella enterica serovar Typhimurium" is published in Microbiology Journal.

Author:Emma R. Holden

Journal:Microbiology Journal

Year:2023

Podcast type:Expert

The authors are Emma R. Holden1​, Muhammad Yasir1​, A. Keith Turner1​, John Wain1​,2​, Ian G. Charles1​,2​ and Mark A. Webber

Affiliations:

1​ Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, NR4 7UQ, UK2​ Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich, Norfolk, NR4 7TJ, UK

This article "Organization and architecture of AggR-dependent promoters from enteroaggregative Escherichia coli" is published in Molecular Microbiology.

Author:Muhammad Yasir

Journal:Molecular Microbiology

Year:2018

Podcast type:Expert

The authors are

Muhammad Yasir, Christopher Icke, Radwa Abdelwahab, James R. Haycocks, Rita E. Godfrey, Pavelas Sazinas, Mark J. Pallen, Ian R. Henderson, Stephen J. W. Busby, Douglas F. Browning

Affiliations:

Institute of Microbiology and Infection, School of
Biosciences, University of Birmingham, Birmingham,
B15 2TT, UK.
2 Quadram Institute Bioscience, Norwich Research Park,
Norwich, NR4 7UA, UK.
3 Faculty of Medicine, Assiut University, Assiut, Egypt.
4 Department of Biotechnology and Biomedicine,
Technical University of Denmark, DK-2800, Kgs Lyngby,
Denmark

This article "Massively parallel transposon mutagenesis identifies temporally essential genes for biofilm formation in Escherichia coli " is published in Microbial Genomics.

Author:Emma R. Holden

Journal:Microbial Genomics

Year:2021

Podcast type:Expert

The authors are

Emma R. Holden1​, Muhammad Yasir1​, A. Keith Turner1​, John Wain1​,2​, Ian G. Charles1​,2​ and Mark A. Webber1​,2​

Affiliations:

 Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk NR4 7UQ, UK

 Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich, Norfolk NR4 7TJ, UK

This article "Chemical biology-whole genome engineering datasets predict new antibacterial combinations" is published in Microbial Genomics Journal.

Author:Arthur K. Turner

Journal:Microbial Genomics Journal

Year:2021

Podcast type:Expert

The authors are

Arthur K. Turner1​, Muhammad Yasir1​, Sarah Bastkowski1​, Andrea Telatin1​, Andrew Page1​,2​, Mark Webber1​,2​ and Ian Charles1​,2

Affiliations:

​ Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK2​ University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK

This article "Antimicrobial resistance and gene regulation in Enteroaggregative Escherichia coli from Egyptian children with diarrhoea: Similarities and differences" is published in Virulence.

Author:Radwa Abdelwahab

Journal:Virulence

Year:2020

Podcast type:Expert

The authors are
Radwa Abdelwahab, Muhammad Yasir, Rita E. Godfrey, Gabrielle S. Christie, Sarah J. Element, Faye Saville, Ehsan A. Hassan, Entsar H. Ahmed, Nagla H. Abu-Faddan, Enas A. Daef, Stephen J. W. Busby & Douglas F. Browning 

Affiliations:

Institute of Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, UK; bFaculty of Medicine, Assiut
University, Assiut, Egypt; cQuadram Institute Bioscience, Norwich Research Park, Norwich, UK

This article "A whole-genome screen identifies Salmonella enterica serovar Typhi genes involved in fluoroquinolone susceptibility" is published in Journal of Antimicrobial chemotherapy .

Author:A. Keith Turner

Journal:Journal of Antimicrobial Chemotherapy

Year:2020

Podcast type:Expert

The authors are A. Keith Turner 1*†, Sabine E. Eckert1, Daniel J. Turner1‡, Muhammud Yasir2, Mark A. Webber Ian G. Charles2,3, Julian Parkhill1§ and John Wain3†

Affiliations:

1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK; 2Quadram Institute, Norwich

Research Park, Colney, Norwich NR4 7UA, UK; 3University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK

*Corresponding author. E-mail: [email protected]

†Present address: Quadram Institute, Norwich Research Park, Colney, Norwich NR4 7UA, UK.

‡Present address: Oxford Nanopore Technologies Ltd, Gosling Building, Edmund Halley Road, Oxford Science Park OX4 4DQ, UK.

§Present address: Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge CB3 OES, UK.

This article "Emergence of Resistance to Fluoroquinolones and Third-Generation Cephalosporins in Salmonella Typhi in Lahore, Pakistan" is published in Microorganisms Journal.

Author:Farhan Rasheed

Journal:Microorganisms Journal

Year:2020

Podcast type:Expert

The authors are Farhan Rasheed, Muhammad Saeed, Nabil-Fareed Alikhan, David Baker, Mohsin Khurshid, Emma V Ainsworth, A Keith Turner, Ambereen Anwar Imran, Muhammad Hidayat Rasool, Muhammad Saqalein, Muhammad Atif Nisar, Muhammad Fayyaz ur Rehman, John Wain, Muhammad Yasir, Gemma C Langridge, Aamer Ikram

Affiliations:

Allama Iqbal Medical College & Jinnah Hospital (AIMC&JHL), Lahore 54000, Pakistan2Department of Microbiology, Government College University, Faisalabad 38000, Pakistan3Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK4Department of Chemistry, University of Sargodha, Sargodha 40100, Pakistan5Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK6National Institute of Health, Islamabad 45710, Pakistan*Authors to whom correspondence should be addressed.

This article "The Aggregated Gut Viral Catalogue (AVrC): A

unified resource for exploring the viral diversity

of the human gut" is published in PLOS Computational Biology.

Author:Anastasia Galperina

Journal:PLOS Computational Biology

Year:2025

Podcast type:Expert

• Anastasia Galperina,
• Gabriele Andrea Lugli,
• Christian Milani,
• Willem M. De Vos,
• Marco Ventura,
• Anne Salonen,
• Bonnie Hurwitz,

Alise Jany Ponsero

Affiliations:

 Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland

Laboratory of Microbiology, Wageningen University, Wageningen, The Netherlands

 Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy, Microbiome Research Hub, University of Parma, Parma, Italy

 Department of Biosystems Engineering, The University of Arizona, Tucson, Arizona, United States of America, BIO5 Institute, The University of Arizona, Tucson, Arizona, United States of America

 Quadram Institute Bioscience, Norwich, United Kingdom

This article "Effect of Trunk Targeted Interventions on

Functional Outcomes in Children with Cerebral

Palsy- A Systematic Review" is published in Developmental Neurorehabilitation.

Author:Aishwarya J. Talgeri

Journal:Developmental Neurorehabilitation

Year:2023

Podcast type:Expert

The authors are Aishwarya J. Talgeri, Akshatha Nayak, Shreekanth D. Karnad, Preyal Jain, Jaya Shanker Tedla, Ravi Shankar Reddy & Devika Rani Sangadala

Affiliations:

Department of Physiotherapy, Kasturba Medical College, Mangalore, Manipal Academy of Higher Education, Manipal, Karnataka, India; 

Department of Medical Rehabilitation Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia