After 43 days, the longest federal government shutdown in history has ended. President Donald Trump signed the legislative spending package into law late Wednesday night after the House passed it 222-209. While the reopening of the government is certainly a step in a positive direction, it comes with lingering questions. First and foremost on that list is whether much of the government will be right back facing the threat of a second shutdown come the end of January, when the continuing resolution is set to expire for a large block of federal agencies. However some agencies, like the Department of Veterans Affairs, Agriculture and the Food and Drug Administration, as well as the legislative branch, will receive full appropriations through fiscal 2026 as lawmakers on the subcommittees that oversee them were able to pass full funding bills as part of the package. On top of that, though the government’s doors are officially back open for business, there will be some lag in getting key services back online and returning workers to their posts. Issues that were key during the 43-day saga like air travel operations and SNAP benefits will take some time to return to normal. As will paying federal employees who were furloughed without pay during the shutdown. And, it’s not clear yet what the end of the shutdown could mean for federal employees who were removed from their jobs via reductions in force since Oct. 1.

The congressional package that reopened the government placed a caveat on funding for the Department of Veterans Affairs’ Electronic Health Record system, putting new pressure on the agency to resolve its yearslong challenges with the rollout. The bill to fund the VA through fiscal 2026 will dish out $3.4 billion for the EHR rollout, but the full amount is contingent on the agency updating Congress on the revised timeline and cost estimates. The provision, tucked into the 394-page spending package, would withhold 30% of the funding until July of next year and gives the agency secretary until June 1 to hand over the requested information. This information includes an updated life-cycle cost estimate for the EHR Modernization program, based on the VA’s announcement earlier this year to accelerate deployments in nine facilities. The Senate also requested a facility-by-facility deployment schedule for all facilities expected to receive the EHRM program, along with the projected federal VA staffing levels and required resources. The secretary is also expected to certify that all VA facilities using the EHR have exceeded or met health care performance metrics and certify that the department has at least four consecutive, successful site deployments without delays or patient harm. It comes after Senate staff was informed in 2023 that the rollout of the EHR system was linked to six cases of “catastrophic harm,” including four deaths. Later that year, the Biden administration paused the EHR rollout.

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