tv.qiagenbioinformatics.com

tv.qiagenbioinformatics.com

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tv.qiagenbioinformatics.com episodes

  • QIAGEN IPA new user training

    Are you new to QIAGEN Ingenuity Pathway Analysis (IPA) or interested in expanding your skill set? Join us as we learn more on large dataset analysis and knowledge base queries using QIAGEN IPA.

    You’ll learn to:

    • Upload multiple dataset types (e.g., RNA-seq, proteomics, metabolomics) and perform interactive core/pathway analysis in IPA

    • Learn how to interpret different results, including pathways, key regulators, impact on biological functions/diseases and more

    • Compare different experimental conditions (e.g., single-cell clusters, disease types) and identify similarities and contrasts

    • Generate a network for hypothesis generation, even without a dataset or experimental design

    Already have an IPA license? Install IPA and start using it now:

    https://qiagen.showpad.com/share/CBv30blCPKFDUYHRWtAvI

    Learn more about IPA or request a free trial: https://digitalinsights.qiagen.com/ipa

    1 hr 57 min
  • [Beginner-friendly] Creating SQL Queries for Biomedical Research

    As the adoption of relational and deeply curated ‘omics databases increases, creating SQL queries has become a mandatory skill rather than a desirable one. Through this training, we will equip you with the know-how and best practices around designing SQL queries – no prior SQL experience required. And while we will use QIAGEN biomedical databases, the knowledge you acquire can be easily applied to other databases.

    Topics will include:

    • Some basics of SQL

    • A brief introduction to databases being used

    • How to generate queries that can help you answer scientific questions (related to disease pathology, MOA, drug response, gene signatures and more)

    • Some applications and frequently asked questions

    • Resources

    Come with your questions, and we’ll address them after the 1-hour training.

    59 min
  • IPA Webinar: Part 2: Formatting and Uploading Your Dataset into IPA

     IPA has broadly been adopted by the life science

    research community and is cited in thousands of articles for the analysis,
    integration, and interpretation of data derived from ‘omics experiments, such
    as RNA-seq, small RNA-seq, microarrays including miRNA and SNP, metabolomics,
    proteomics, and small scale experiments. Hosted by two QIAGEN Senior Scientists,
    this series will show you step-by-step how to implement and use IPA to get the
    most out of your data.

    Part 2: Formatting and Uploading Your Dataset into IPA

    Learn how to format your own data and upload it into IPA so

    that you can perform pathway visualization and various different types of
    analyses. Learn how to:

    •                    Format and upload the data to be analyzed by IPA

    •                    Explore

    your uploaded data and start an analysis

    Interested in learning more or trying IPA? Click here.

    39 min
  • Data Formatting in IPA

    Learn how to format your dataset for upload and subsequent analysis in

    IPA. In this video tutorial, you will discover the best practices for
    structuring your dataset and the data measurement value types you can
    use for various IPA analyses.

    Interested in

    learning more?

    Click here


    8 min
  • QIAGEN CLC Genomics Workbench 20 – scalable desktop software for NGS data...

    In this webinar, Leif Schauser, Ph.D., Director Product Management Genome Analysis, will review the latest features in the new QIAGEN CLC Genomics Workbench 20. The following topics will be covered:

    • One-click solutions and expert tools for NGS data analysis
    • Working with reads from various platforms (Illumina, IonTorrent, Oxford Nanopore, Pacific Biosciences, BGI/MGI)
    • Tailored solutions for RNA-seq, DNA-seq and methylation
    • Efficient algorithms for read trimming, mapping, de novo assembly and variant calling
    • Effective management of reference data
    • Scalable processing of many samples, with advanced workflow and reporting capabilities
    • Easy installation on Windows, Mac and Linux

    Interested in learning more?

    Click here

    54 min
  • IPA causal scoring

    In the IPA desktop app, you can rapidly interrogate any pathway or network to discover relevant entities that may causally impact (or are impacted by) molecules on the pathway or network. This enables you to explore and generate hypotheses much faster than ever before in IPA. For example, you could discover upstream chemical inhibitors of a pathway of interest, find pathways that are likely inhibited by the activation of another, or explore how upstream drivers can lead to downstream outcomes.

    2 min
  • Share IPA Interpret Analyses

    IPA Interpret identifies and summarizes the biological themes in your results with the help of AI, creating a shareable, interactive report.

    In this video, we’ll walk you through how to share analyses created in IPA Interpret.

    Want to learn more? Visit us at https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/analysis-and-visualization/qiagen-ipa/qiagen-ipa-interpret/

    2 min

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