This article "A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses" is published in Molecular Ecology Resources.
Author: Ali Hakimzadeh
Journal: Molecular Ecology Resources
Year: 2024
Podcast type: Short
The authors are:
⦁ Ali Hakimzadeh
⦁ Alejandro Abdala Asbun
⦁ Davide Albanese
⦁ Maria Bernard
⦁ Dominik Buchner
⦁ Benjamin Callahan
⦁ J. Gregory Caporaso
⦁ Emily Curd
⦁ Christophe Djemiel
⦁ Mikael Brandström Durling
⦁ Vasco Elbrecht
⦁ Zachary Gold
⦁ Hyun S. Gweon
⦁ Mehrdad Hajibabaei
⦁ Falk Hildebrand
⦁ Vladimir Mikryukov
⦁ Eric Normandeau
⦁ Ezgi Özkurt
⦁ Jonathan M. Palmer
⦁ Géraldine Pascal
⦁ Teresita M. Porter
⦁ Daniel Straub
⦁ Martti Vasar
⦁ Tomáš Větrovský
⦁ Haris Zafeiropoulos
⦁ Sten Anslan
Affiliations:
Ali Hakimzadeh — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
Alejandro Abdala Asbun — Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands
Davide Albanese — Unit of Computational Biology, Research and Innovation Centre, Fondazione Edmund Mach, Italy
Maria Bernard — INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, France; INRAE, SIGENAE, Jouy-en-Josas, France
Dominik Buchner ,Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany
Benjamin Callahan, Department of Population Health and Pathobiology, College of Veterinary Medicine and Bioinformatics Research Center, North Carolina State University, Raleigh, North Carolina, USA
J. Gregory Caporaso, Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA
Emily Curd, Vermont Biomedical Research Network, University of Vermont, Burlington, Vermont, USA
Christophe Djemiel, Agroécologie, INRAE, Institut Agro, Univ. Bourgogne Franche-Comté, Dijon, France
Mikael Brandström Durling, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden
Vasco Elbrecht — Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany
Zachary Gold — NOAA Pacific Marine Environmental Laboratory, Seattle, Washington, USA
Hyun S. Gweon — UK Centre for Ecology & Hydrology, Oxfordshire, UK; School of Biological Sciences, University of Reading, Reading, UK
Mehrdad Hajibabaei — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
Falk Hildebrand — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK
Vladimir Mikryukov — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
Eric Normandeau — Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada
Ezgi Özkurt — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK
Jonathan M. Palmer — Center for Forest Mycology Research, Northern Research Station, US Forest Service, Madison, Wisconsin, USA
Géraldine Pascal — GenPhySE, Université de Toulouse, INRAE, ENVT, Castanet Tolosan, France
Teresita M. Porter — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
Daniel Straub — Quantitative Biology Center (QBiC), University of Tübingen, Tübingen, Germany
Martti Vasar — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
Tomáš Větrovský — Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Praha, Czech Republic
Haris Zafeiropoulos — KU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Laboratory of Molecular Bacteriology, Leuven, Belgium
Sten Anslan — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia; Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
