ReSay

This article "A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses" is published in Molecular Ecology Resources.

Author: Ali Hakimzadeh

Journal: Molecular Ecology Resources

Year: 2024

Podcast type: Short

The authors are:

⦁ Ali Hakimzadeh

⦁ Alejandro Abdala Asbun

⦁ Davide Albanese

⦁ Maria Bernard

⦁ Dominik Buchner

⦁ Benjamin Callahan

⦁ J. Gregory Caporaso

⦁ Emily Curd

⦁ Christophe Djemiel

⦁ Mikael Brandström Durling

⦁ Vasco Elbrecht

⦁ Zachary Gold

⦁ Hyun S. Gweon

⦁ Mehrdad Hajibabaei

⦁ Falk Hildebrand

⦁ Vladimir Mikryukov

⦁ Eric Normandeau

⦁ Ezgi Özkurt

⦁ Jonathan M. Palmer

⦁ Géraldine Pascal

⦁ Teresita M. Porter

⦁ Daniel Straub

⦁ Martti Vasar

⦁ Tomáš Větrovský

⦁ Haris Zafeiropoulos

⦁ Sten Anslan

Affiliations:

Ali Hakimzadeh — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Alejandro Abdala Asbun — Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands

Davide Albanese — Unit of Computational Biology, Research and Innovation Centre, Fondazione Edmund Mach, Italy

Maria Bernard — INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, France; INRAE, SIGENAE, Jouy-en-Josas, France

Dominik Buchner ,Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany

Benjamin Callahan, Department of Population Health and Pathobiology, College of Veterinary Medicine and Bioinformatics Research Center, North Carolina State University, Raleigh, North Carolina, USA

J. Gregory Caporaso, Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA

Emily Curd, Vermont Biomedical Research Network, University of Vermont, Burlington, Vermont, USA

Christophe Djemiel, Agroécologie, INRAE, Institut Agro, Univ. Bourgogne Franche-Comté, Dijon, France

Mikael Brandström Durling, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden

Vasco Elbrecht — Aquatic Ecosystem Research, University of Duisburg-Essen, Essen, Germany

Zachary Gold — NOAA Pacific Marine Environmental Laboratory, Seattle, Washington, USA

Hyun S. Gweon — UK Centre for Ecology & Hydrology, Oxfordshire, UK; School of Biological Sciences, University of Reading, Reading, UK

Mehrdad Hajibabaei — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada

Falk Hildebrand — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK

Vladimir Mikryukov — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Eric Normandeau — Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada

Ezgi Özkurt — Gut Microbes & Health, Quadram Institute Bioscience, Norfolk, UK; Earlham Institute, Norwich Research Park, Norfolk, UK

Jonathan M. Palmer — Center for Forest Mycology Research, Northern Research Station, US Forest Service, Madison, Wisconsin, USA

Géraldine Pascal — GenPhySE, Université de Toulouse, INRAE, ENVT, Castanet Tolosan, France

Teresita M. Porter — Department of Integrative Biology and Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada

Daniel Straub — Quantitative Biology Center (QBiC), University of Tübingen, Tübingen, Germany

Martti Vasar — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia

Tomáš Větrovský — Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Praha, Czech Republic

Haris Zafeiropoulos — KU Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Laboratory of Molecular Bacteriology, Leuven, Belgium

Sten Anslan — Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia; Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland

This article "Impact of chickpea hummus on postprandial blood glucose, insulin and gut hormones in healthy humans combined with mechanistic studies of food structure, rheology and digestion kinetics" is published in Food Research International.

Author:⁠⁠ Rasha A. Alshaalan

Journal: Food Research International

Year: 2024

Podcast type: Short

The authors are:

• Rasha A. Alshaalan
• Maria N. Charalambides
• Cathrina H. Edwards
• Peter R. Ellis
• Shatha H. Alrabeah
• Gary S. Frost

Affiliations:

Rasha A. Alshaalan — Nutrition and Dietetic Research Group, Faculty of Medicine, Imperial College London, London, UK

Rasha A. Alshaalan — Department Health Sciences, Clinical Nutrition Program, College of Health and Rehabilitation Sciences, Princess Nourah Bint Abdulrahman University, Riyadh, Saudi Arabia

Maria N. Charalambides — Department of Mechanical Engineering, Imperial College London, London, UK

Cathrina H. Edwards — Quadram Institute Bioscience, Norwich Research Park, Norwich, UK

Peter R. Ellis — Biopolymers Group, Departments of Biochemistry and Nutrition, Faculty of Life Sciences and Medicine, King’s College London, UK

Shatha H. Alrabeah — Nutrition and Dietetic Research Group, Faculty of Medicine, Imperial College London, London, U

Gary S. Frost — Nutrition and Dietetic Research Group, Faculty of Medicine, Imperial College London, London, UK

This article "A (poly)phenol-rich diet reduces serum and faecal calprotectin in older adults with increased intestinal permeability: the MaPLE randomised controlled trial" is published in BMC Geriatrics.

Author:⁠⁠ Mirko Marino

Journal: BMC Geriatrics

Year: 2024

Podcast type: Short

The authors are:

• Mirko Marino
• Cristian Del Bo’
• Daniela Martini
• Simone Perna
• Marisa Porrini
• Antonio Cherubini
• Giorgio Gargari
• Tomás Meroño
• Nicole Hidalgo-Liberona
• Cristina Andres-Lacueva
• Paul A. Kroon
• Simone Guglielmetti
• Patrizia Riso

Affiliations:

Mirko Marino, Cristian Del Bo’, Daniela Martini, Marisa Porrini, Patrizia Riso — Department of Food, Environmental and Nutritional Sciences (DeFENS), Division of Human Nutrition, Università degli Studi di Milano, Milano, Italy

Antonio Cherubini — Geriatria, Accettazione Geriatrica e Centro di Ricerca per l’Invecchiamento, IRCCS INRCA, Ancona, Italy

Antonio Cherubini — Department of Clinical and Experimental Medicine, Università Politecnica delle Marche, Ancona, Italy

Giorgio Gargari — Department of Food, Environmental and Nutritional Sciences (DeFENS), Division of Food Microbiology and Bioprocesses, Università degli Studi di Milano, Milano, Italy

Tomás Meroño, Nicole Hidalgo-Liberona, Cristina Andres-Lacueva — Biomarkers and Nutrimetabolomics Laboratory, Department of Nutrition, Food Sciences and Gastronomy, Faculty of Pharmacy and Food Sciences, CiberFES, ISCIII, University of Barcelona, Barcelona, Spain

Paul A. Kroon — Quadram Institute Bioscience, Norwich Research Park, Norwich, UK

Simone Guglielmetti — Department of Biotechnology and Biosciences (BtBs), Università degli Studi di Milano-Bicocca, Milano, Italy

This article "Modulation of gut microbiota and metabolites by Flammulina velutipes polysaccharides during in vitro human fecal fermentation: Unveiling Bacteroides as a potential primary degrader" is published in Food Chemistry.

Author:⁠⁠ Zi Ye

Journal: Food Chemistry

Year: 2024

Podcast type: Short

The authors are:

• Zi Ye
• Leilei Yu
• Chuan Zhang
• Yuhang Gao
• Jianxin Zhao
• Arjan Narbad
• Wei Chen
• Qixiao Zhai
• Fengwei Tian

Affiliations:

Zi Ye, Leilei Yu, Chuan Zhang, Yuhang Gao, Jianxin Zhao, Wei Chen, Qixiao Zhai, Fengwei Tian — State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi, Jiangsu, China

Zi Ye, Leilei Yu, Chuan Zhang, Yuhang Gao — School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu, China

Leilei Yu, Jianxin Zhao, Wei Chen, Qixiao Zhai, Fengwei Tian — International Joint Research Laboratory for Probiotics, Jiangnan University, Wuxi, Jiangsu, China

Jianxin Zhao, Wei Chen — National Engineering Research Center for Functional Food, Jiangnan University, Wuxi, Jiangsu, China

Arjan Narbad — Gut Health and Microbiome Institute Strategic Programme, Quadram Institute Bioscience, Norwich, UK

This article "Wheat MYOSIN-RESEMBLING CHLOROPLAST PROTEIN controls B-type starch granule initiation timing during endosperm development" is published in Plant Physiology.

Author:⁠⁠ Jiawen Chen

Journal: Plant Physiology

Year: 2024

Podcast type: Short

The authors are:

• Jiawen Chen
• Yi Chen
• Alexander Watson-Lazowski
• Erica Hawkins
• J. Elaine Barclay
• Brendan Fahy
• Robin Denley Bowers
• Kendall Corbin
• Frederick J. Warren
• Andreas Blennow
• Cristobal Uauy
• David Seung

Affiliations:

Jiawen Chen, Yi Chen, Alexander Watson-Lazowski, Erica Hawkins, J. Elaine Barclay, Brendan Fahy, Robin Denley Bowers, Cristobal Uauy, David Seung, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK

Alexander Watson-Lazowski, Harper Adams University, Newport TF10 8NB, UK

Kendall Corbin, Quadram Institute, Norwich Research Park, Norwich NR4 7UQ, UK

Kendall Corbin, Department of Horticulture, College of Agriculture, Food and Environment, University of Kentucky, Lexington, KY 40546-0312, USA

Frederick J. Warren, Quadram Institute, Norwich Research Park, Norwich NR4 7UQ, UK

Andreas Blennow, Department of Plant and Environmental Science, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg, Copenhagen 1871, Denmark

This article "Modification of the Intestinal Microbiota with Enterobacteriaceae-specific Oligonucleotide Antimicrobials as a Novel Approach to Improve Metabolic Health" is published in Diabetes & Obesity International Journal.

Author:⁠⁠ Michael McArthur

Journal: Diabetes & Obesity International Journal

Year: 2024

Podcast type: Short

The authors are:

• N. Wong
• D. Divekar
• T. D. Calvo
• A. Watson
• M. J. Mayer
• M. McArthur
• Arjan Narbad

Affiliations:

N. Wong, D. Divekar, A. Watson, M. J. Mayer, M. McArthur, Arjan Narbad, Quadram Institute, Norwich Research Park, UK

N. Wong, D. Divekar, T. D. Calvo, M. McArthur, Norwich Medical School, University of East Anglia, Norwich Research Park, UK

This article "Sticking together: independent evolution of biofilm formation in different species of staphylococci has occurred multiple times via different pathways" is published in BMC Genomics.

Author:⁠⁠ Lisa Crossman

Journal: BMC Genomics

Year: 2024

Podcast type: Short

The authors are:

• Lisa Crossman
• Leanne Sims
• Rachael Dean
• Heather Felgate
• Teresa Diaz Calvo
• Claire Hill
• Iain McNamara
• Mark A. Webber
• John Wain

Affiliations:

Lisa Crossman, Leanne Sims, Rachael Dean, Heather Felgate, Teresa Diaz Calvo, Claire Hill, Mark A. Webber, John Wain, Quadram Institute Bioscience, Norwich, UK

Lisa Crossman, School of Biological Sciences, University of East Anglia, Norwich, UK

Lisa Crossman, SequenceAnalysis.Co.Uk, Norwich, UK

Teresa Diaz Calvo, Mark A. Webber, John Wain, School of Medicine, University of East Anglia, Norwich, UK

Iain McNamara, Norwich University Hospital, Norwich, UK

This article " A systematic review of the impact of post-harvest aquatic food processing technology on gender equality and social justice" is published in Nature Food.

Author:⁠⁠Nitya Rao

Journal: Nature Food

Year:2024

Podcast type:Short

The authors are:

• Nitya Rao
• Lee Hooper
• Heather Gray
• Natasha Grist
• Johanna Forster
• Julie Bremner
• Ghezal Sabir
• Matthew Heaton
• Nisha Marwaha
• Sudarshan Thakur
• Abraham Wanyama
• Liangzi Zhang

Affiliations:

University of East Anglia, Norwich, UK:

• Nitya Rao (School of Global Development)

• Lee Hooper (Norwich Medical School, Nutrition and Hydration)

• Heather Gray (School of Global Development)

• Natasha Grist (Norwich Institute for Sustainable Development)

• Johanna Forster (School of Global Development)

• Julie Bremner (Collaborative Centre for Sustainable Use of the Seas, School of Environmental Sciences)

• Matthew Heaton (Norwich Institute for Sustainable Development)

• Nisha Marwaha (School of Global Development)

• Abraham Wanyama (School of Global Development)

• Liangzi Zhang (Food & Nutrition National Bioscience Research Infrastructure, Quadram Institute Bioscience)

Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, UK:

• Julie Bremner

Research Institute of Organic Agriculture FiBL, Frick, Switzerland:

• Ghezal Sabir (Food System Sciences)

Professional Assistance for Development Action, Bhopal, India:

• Sudarshan Thakur

Quadram Institute Bioscience, Norwich, UK:

• Liangzi Zhang (Food & Nutrition National Bioscience Research Infrastructure)

This article " Capturing clinically relevant Campylobacter attributes through direct whole genome sequencing of stool" is published in Microbial Genomics.

Author:⁠⁠Bilal Djeghout

Journal: Microbial Genomics

Year:2024

Podcast type:Short

The authors are:

• Bilal Djeghout
• Thanh Le-Viet
• Leonardo de Oliveira Martins
• George M. Savva
• Rhiannon Evans
• David Baker
• Andrew Page
• Ngozi Elumogo
• John Wain
• Nicol Janecko

Affiliations:

Bilal Djeghout, Thanh Le-Viet, Leonardo de Oliveira Martins, George M. Savva, Rhiannon Evans, David Baker, Andrew Page, John Wain, Nicol Janecko, Ngozi Elumogo,Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK

Ngozi Elumogo,Eastern Pathology Alliance, Norfolk and Norwich University Hospital, Norwich NR4 7UY, UK

John Wain,Norwich Medical School, University of East Anglia, Norwich NR4 7TJ, UK

This article "Maternal gut Bifidobacterium breve modifies fetal brain metabolism in germ-free mice" is published in Molecular Metabolism.

Author:⁠⁠Jorge Lopez-Tello

Journal: Molecular Metabolism

Year:2024

Podcast type:Short

The authors are:

• Jorge Lopez-Tello
• Raymond Klu
• Zoe Schofield
• Cindy X.W. Zhang
• Douwe van Sinderen
• Gwénaëlle Le Gall
• Lindsay J. Hall
• Amanda N. Sferruzzi-Perri

Affiliations:

Jorge Lopez-Tello:Department of Physiology, Development, and Neuroscience, Centre for Trophoblast Research, University of Cambridge, Cambridge, UK,Department of Physiology, Faculty of Medicine, Autonomous University of Madrid, Spain,Institute of Microbiology & Infection, University of Birmingham, Birmingham, UK

Raymond Klu,Food, Microbiome & Health, Quadram Institute Bioscience, Norwich Research Park, Norwich, UK,Department of Microbes, Infection & Microbiomes, School of Infection, Inflammation & Immunology, University of Birmingham, Birmingham, UK

Zoe Schofield,Food, Microbiome & Health, Quadram Institute Bioscience, Norwich Research Park, Norwich, UK

Cindy X.W. Zhang,Department of Physiology, Development, and Neuroscience, Centre for Trophoblast Research, University of Cambridge, Cambridge, UK

Douwe van Sinderen,APC Microbiome Institute, University College Cork, Cork, Ireland

Gwénaëlle Le Gall,Norwich Medical School, University of East Anglia, Bob Champion Research and Education Building, James Watson Road, Norwich Research Park, Norwich NR4 7UQ, UK

Lindsay J. Hall,Food, Microbiome & Health, Quadram Institute Bioscience, Norwich Research Park, Norwich, UK,Department of Microbes, Infection & Microbiomes, School of Infection, Inflammation & Immunology, University of Birmingham, Birmingham, UK,APC Microbiome Institute, University College Cork, Cork, Ireland

Amanda N. Sferruzzi-Perri,Department of Physiology, Development, and Neuroscience, Centre for Trophoblast Research, University of Cambridge, Cambridge, UK