The Metabolomist podcast

The Metabolomist podcast

By biocrates life sciencesScienceLife SciencesNatural SciencesChemistry
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The Metabolomist podcast episodes

  • The Metabolomist - Welcome to this new podcast | What it is about?

    Dr. Alice Limonciel

    Senior Scientist | Data Interpretation at biocrates life sciences ag.

    Favorite metabolite

    Asymmetric dimethylarginine (ADMA)

    Connecting ideas to improve our understanding of biology; that’s what data interpretation is about. In the episodes of this podcast I host, I put each metabolomist’s story in the spotlight to expand our metabolomics interpretation toolbox.

    My background is in molecular toxicology, with a strong focus on omics analysis and integration. Today, I use these skills to tell the stories that twinkle in the depths of metabolomic datasets.

    4 min
  • Sex differences in metabolomics & AI-based networks | Jan Krumsiek

    Jan Krumsiek

    Assistant professor at the Institute for Computational Biomedicine,
    Weill Cornell Medicine, New York

    Krumsiek lab @Cornell

    Favorite metabolite

    2-Hydroxyglutarate

    Discussed paper by Krumsiek et. al.

    Gender-specific pathway differences in the human serum metabolome

    Getting started with Gaussian graphical models (GGMs)

    MoDentify R package

    Modular metabolomics pipeline

    maplet R toolbox

    Open access multi-omic tools discussed (from other groups)

    Multi-omics factor analysis (MOFA)
    OmicsAnalyst

    Other resources

    Krumsiek lab github repository

    More about The Metabolomist podcast

    47 min
  • Data sharing & stratification in metabolomics | Gabi Kastenmüller

    Dr. Gabi Kastenmüller

    Group leader Metabolomics at the Institute of Bioinformatics and Systems Biology (IBIS), Helmholtz Zentrum München, Germany (since 2011)

    Kastenmueller group @Helmholtz

    Favorite metabolite

    b-citryl-L-glutamate

    Discussed paper by Arnold et. al.

    Sex and APOE ε4 genotype modify the Alzheimer’s disease serum metabolome

    Database links discussed

    AD Atlas
    Omicscience
    Snipa
    GWAS Server

    Other resources

    Talk about the Omicscience platform by Prof. Claudia Langenberg
    (given at the biocrates Pan-Cohort Metabolomics event 2021)

    More about The Metabolomist podcast

    44 min

About The Metabolomist podcast

From the publisher's feed

In this interview podcast you can learn how scientists and entrepreneurs create the future of metabolomics. Learn about their struggles, stresses and successes to shape the story of metabolomics as it…