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This article "Peptide abundance correlations in metaproteomics enhance taxonomic and functional analysis of the human gut microbiome" is published in NPJ BIOFILMS AND MICROBIOMES.

Author: Zhongzhi Sun

Journal: NPJ BIOFILMS AND MICROBIOMES

Year: 2025 Podcast

type: Expert

The authors are:

• Zhongzhi Sun
• Zhibin Ning
• Qing Wu
• Leyuan Li
• Andrew C. Doxey
• Daniel Figeys

Affiliations:

University of Ottawa, Ottawa, ON, Canada. Beijing Institute of Lifeomics, Beijing, China. University of Waterloo, Waterloo, ON, Canada. Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, UK. University of East Anglia, Norwich, Norfolk, UK.

This article "Intestinal interoceptive dysfunction drives age-associated cognitive decline" is published in NATURE.

Author: Timothy O. Cox Journal: NATURE Year: 2026 Podcast type: Short

The authors are:

• Timothy O. Cox
• Ashwarya S. Devason
• Alan de Araujo
• Sydney Mason
• Madhav Subramanian
• Andrea F. M. Salvador
• Hélène C. Descamps
• Junwon Kim
• Yixuan Zhu
• Lev Litichevskiy
• Sunhee Jung
• Won-Suk Song
• Adrián Cortés-Martín
• Nathan T. Henderson
• Kuei-Pin Huang
• Thao Nguyen
• Wisath Sae-Lee
• Iboro C. Umana
• Maria Sacta
• Ryan J. Rahman
• Stephen Wisser
• J. Andrew D. Nelson
• Ilona Golynker
• Alana M. McSween
• Eric F. Hohmann
• Shaan Patel
• Anna L. Bub
• Clara Soekler
• Niklas Blank
• Kevt'her Hoxha
• Lavinia Boccia
• Andrea C. Wong
• Klaas Bahnsen
• Jihee Kim
• Natalie Biderman
• Dina Abbasian
• Clarissa Shoffler
• Christopher Petucci
• Fiona E. McAllister
• Amber L. Alhadeff
• Marc V. Fuccillo
• Colin Hill
• Cholsoon Jang
• J. Nicholas Betley
• Guillaume de Lartigue
• Virginia Y.-M. Lee
• Maayan Levy
• Christoph A. Thaiss

Affiliations:

University of Pennsylvania, Philadelphia, PA, USA. Monell Chemical Senses Center, Philadelphia, PA, USA. Arc Institute, Palo Alto, CA, USA. Stanford University, Stanford, CA, USA. University of California Irvine, Irvine, CA, USA. University College Cork, Cork, Ireland. Calico Life Sciences LLC, San Francisco, CA, USA. Children's Hospital of Philadelphia, Philadelphia, PA, USA.

This article "Fecal microbiota transfer between young and aged mice reverses hallmarks of the aging gut, eye, and brain" is published in MICROBIOME.

Author: Aimée Parker Journal: MICROBIOME Year: 2022 Podcast type: Short

The authors are:

• Aimée Parker
• Stefano Romano
• Rebecca Ansorge
• Asmaa Aboelnour
• Gwenaelle Le Gall
• George M. Savva
• Matthew G. Pontifex
• Andrea Telatin
• David Baker
• Emily Jones
• David Vauzour
• Steven Rudder
• L. Ashley Blackshaw
• Glen Jeffery
• Simon R. Carding

Affiliations:

Quadram Institute, Norwich, UK. University College London, London, UK. University of East Anglia, Norwich, UK.

This article "Habitual coffee intake shapes the gut microbiome and modifies host physiology and cognition" is published in NATURE COMMUNICATIONS.

Author: Serena Boscaini

Journal: NATURE COMMUNICATIONS

Year: 2026

Podcast type: Short

The authors are:

• Serena Boscaini
• Thomaz F. S. Bastiaanssen
• Gerard M. Moloney
• Federica Bergamo
• Laila Zeraik
• Caroline O'Leary
• Aimone Ferri
• Maha Irfan
• Maaike van der Rhee
• Thaïs I. F. Lindemann
• Elizabeth Schneider
• Arthi Chinna Meyyappan
• Kirsten Berding Harold
• Caitríona M. Long-Smith
• Carina Carbia
• Kenneth J. O'Riordan
• José Fernando Rinaldi de Alvarenga
• Nicole Tosi
• Daniele Del Rio
• Alice Rosi
• Letizia Bresciani
• Pedro Mena
• Gerard Clarke
• John F. Cryan

Affiliations:

University College Cork, Cork, Ireland. University of Parma, Parma, Italy.

This article "Genome modelling and design across all domains of life with Evo 2" is published in NATURE.

Author: Garyk Brixi Journal: NATURE Year: 2026 Podcast type: Short

The authors are:

• Garyk Brixi
• Matthew G. Durrant
• Jerome Ku
• Mohsen Naghipourfar
• Michael Poli
• Gwanggyu Sun
• Greg Brockman
• Daniel Chang
• Alison Fanton
• Gabriel A. Gonzalez
• Samuel H. King
• David B. Li
• Aditi T. Merchant
• Eric Nguyen
• Chiara Ricci-Tam
• David W. Romero
• Jonathan C. Schmok
• Ali Taghibakhshi
• Anton Vorontsov
• Brandon Yang
• Myra Deng
• Liv Gorton
• Nam Nguyen
• Nicholas K. Wang
• Michael T. Pearce
• Elana Simon
• Etowah Adams
• Zachary J. Amador
• Euan A. Ashley
• Stephen A. Baccus
• Haoyu Dai
• Steven Dillmann
• Stefano Ermon
• Daniel Guo
• Michael H. Herschl
• Rajesh Ilango
• Ken Janik
• Amy X. Lu
• Reshma Mehta
• Mohammad R. K. Mofrad
• Madelena Y. Ng
• Jaspreet Pannu
• Christopher Ré
• John St. John
• Jeremy Sullivan
• Joseph Tey
• Ben Viggiano
• Kevin Zhu
• Greg Zynda
• Daniel Balsam
• Patrick Collison
• Anthony B. Costa
• Tina Hernandez-Boussard
• Eric Ho
• Ming-Yu Liu
• Thomas McGrath
• Kimberly Powell
• Sudarshan Pinglay
• Dave P. Burke
• Hani Goodarzi
• Patrick D. Hsu
• Brian L. Hie

Affiliations:

Arc Institute, Palo Alto, CA, USA. Evo 2 Core Team, Palo Alto, CA, USA. Stanford University, Stanford, CA, USA. University of California, Berkeley, Berkeley, CA, USA. Liquid AI, San Francisco, CA, USA. Independent Researcher, San Francisco, CA, USA. NVIDIA, Santa Clara, CA, USA. Goodfire, San Francisco, CA, USA. Columbia University, New York, NY, USA. University of Washington, Seattle, WA, USA. Johns Hopkins University, Baltimore, MD, USA. University of California, San Francisco, San Francisco, CA, USA. OpenAI, San Francisco, CA, USA.

This article "NSD2 targeting reverses plasticity and drug resistance in prostate cancer" is published in Nature.

Author: Jia J. Li

Journal: Nature

Year: 2025

Podcast type: Short

The authors are:

• Jia J. Li
• Alessandro Vasciaveo
• Dimitris Karagiannis
• Zhen Sun
• Kristjan H. Gretarsson
• Xiao Chen
• Ouathek Ouerfelli
• Fabio Socciarelli
• Ziv Frankenstein
• Hanyang Dong
• Min Zou
• Wei Yuan
• Guangli Yang
• Gabriel M. Aizenman
• Tania Pannellini
• Xinjing Xu
• Himisha Beltran
• Yu Chen
• Kevin Gardner
• Brian D. Robinson
• Johann de Bono
• Or Gozani
• Cory Abate-Shen
• Mark A. Rubin
• Massimo Loda
• Charles L. Sawyers
• Andrea Califano
• Chao Lu
• Michael M. Shen

Affiliations:

Jia J. Li, Cory Abate-Shen, Andrea Califano, Michael M. Shen, Department of Medicine, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Jia J. Li, Alessandro Vasciaveo, Cory Abate-Shen, Andrea Califano, Michael M. Shen, Department of Systems Biology, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Jia J. Li, Dimitris Karagiannis, Kristjan H. Gretarsson, Xiao Chen, Chao Lu, Michael M. Shen, Department of Genetics and Development, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Jia J. Li, Cory Abate-Shen, Michael M. Shen, Department of Urology, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Jia J. Li, Alessandro Vasciaveo, Dimitris Karagiannis, Kristjan H. Gretarsson, Xiao Chen, Ziv Frankenstein, Min Zou, Cory Abate-Shen, Andrea Califano, Chao Lu, Michael M. Shen, Herbert Irving Comprehensive Cancer Center, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Alessandro Vasciaveo, Gabriel M. Aizenman, Center for Data Science and Artificial Intelligence, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA

Alessandro Vasciaveo, Gabriel M. Aizenman, Center for Therapeutics Discovery, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA

Alessandro Vasciaveo, Gabriel M. Aizenman, Cancer Genome and Epigenetics Program, NCI-Designated Cancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA

Zhen Sun, Yu Chen, Charles L. Sawyers, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA

Ouathek Ouerfelli, Guangli Yang, Organic Synthesis Core Facility, Memorial Sloan Kettering Cancer Center, New York, NY, USA

Fabio Socciarelli, Tania Pannellini, Brian D. Robinson, Massimo Loda, Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY, USA

Ziv Frankenstein, Kevin Gardner, Cory Abate-Shen, Department of Pathology and Cell Biology, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

Hanyang Dong, Or Gozani, Department of Biology, Stanford University, Stanford, CA, USA

Min Zou, Cory Abate-Shen, Department of Molecular Pharmacology and Therapeutics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY,

USA Wei Yuan, Johann de Bono, Division of Clinical Studies, The Institute of Cancer Research, London, UK

Himisha Beltran, Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, USA

Yu Chen, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA Mark

A. Rubin, Department of Biomedical Research, Bern Center for Precision Medicine, University of Bern, Bern, Switzerland

Massimo Loda, Nuffield Department of Surgical Sciences, Lincoln College, University of Oxford, Oxford, UK

Charles L. Sawyers, Howard Hughes Medical Institute, Memorial Sloan Kettering Cancer Center, New York, NY, USA Andrea Califano, Department of Biomedical Informatics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA Andrea Califano, Department of Biochemistry and Molecular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA

This article "Discovery of Late Intermediates in Methylenomycin Biosynthesis Active against Drug-Resistant Gram-Positive Bacterial Pathogens" is published in JOURNAL OF THE AMERICAN CHEMICAL SOCIETY.

Author: Christophe Corre

Journal: JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Year: 2025

Podcast type: Short

The authors are:

• Christophe Corre
• Gideon A. Idowu
• Lijiang Song
• Melanie E. Whitehead
• Lona M. Alkhalaf
• Gregory L. Challis

Affiliations:

Christophe Corre, Gideon A. Idowu, Lijiang Song, Melanie E. Whitehead, Lona M. Alkhalaf, Gregory L. Challis, Department of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.

Christophe Corre, School of Life Sciences, University of Warwick, Coventry CV4 7AL, U.K. Gregory L. Challis, Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute and ARC Centre of Excellence for Innovations in Peptide and Protein Science, Monash University, Clayton, Victoria 3800, Australia

This article "Mass-spectrometry-based draft of the human proteome" is published in Nature.

Author: Mathias Wilhelm

Journal: Nature

Year: 2014

Podcast type: Short

The authors are:

• Mathias Wilhelm
• Judith Schlegl
• Hannes Hahne
• Amin Moghaddas Gholami
• Marcus Lieberenz
• Mikhail M. Savitski
• Emanuel Ziegler
• Lars Butzmann
• Siegfried Gessulat
• Harald Marx
• Toby Mathieson
• Simone Lemeer
• Karsten Schnatbaum
• Ulf Reimer
• Holger Wenschuh
• Martin Mollenhauer
• Julia Slotta-Huspenina
• Joos-Hendrik Boese
• Marcus Bantscheff
• Anja Gerstmair
• Franz Faerber
• Bernhard Kuster

Affiliations:

Mathias Wilhelm, Hannes Hahne, Amin Moghaddas Gholami, Harald Marx, Simone Lemeer, Bernhard Kuster, Chair of Proteomics and Bioanalytics (Technical University of Munich)

Mathias Wilhelm, Judith Schlegl, Marcus Lieberenz, Emanuel Ziegler, Lars Butzmann, Siegfried Gessulat, Joos-Hendrik Boese, Anja Gerstmair, Franz Faerber.

The article "Multi-agent AI enables evidence-based cell annotation in single-cell transcriptomics" is from a preprint server and was posted on bioRxiv.

Author: Gautam Ahuja

Journal: bioRxiv

Year: 2025

Podcast type: Short

The authors are:

• Gautam Ahuja
• Alex Antill
• Yi Su
• Giovanni Marco Dall'Olio
• Sukhitha Basnayake
• Göran Karlsson
• Parashar Dhapola

Affiliations:

Gautam Ahuja, Yi Su, Sukhitha Basnayake, Parashar Dhapola, Nygen Analytics AB, Medicon Village, Lund, Sweden

Alex Antill, Göran Karlsson, Stem Cell and Leukemia Lab, Lund University, Sweden Giovanni Marco Dall'Olio, GMD Bioinformatics, UK

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This article "Antimicrobial resistance and comparative genome analysis of high-risk Escherichia coli clones isolated from Egyptian children with diarrhoea" is from a preprint server and was posted on bioRxiv.

Author: Radwa Abdelwahab

Journal: bioRxiv

Year: 2025

Podcast type: Short

The authors are:

• Radwa Abdelwahab
• Munirah M. Alhammadi
• Muhammad Yasir
• Ehsan A. Hassan
• Entsar H. Ahmed
• Nagla H. Abu-Faddan
• Enas A. Daef
• Stephen J. W. Busby
• Douglas F. Browning

Affiliations:

Radwa Abdelwahab, Muhammad Yasir, Stephen J. W. Busby, Institute of Microbiology and Infection. School of Biosciences, University of Birmingham. Birmingham. B15 2TT, UK

Radwa Abdelwahab, Ehsan A. Hassan, Entsar H. Ahmed, Nagla H. Abu-Faddan, Enas A. Daef, Faculty of Medicine, Assiut University, Assiut 71515, Egypt

Munirah M. Alhammadi, Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia

Douglas F. Browning, Quadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UQ, UK

Douglas F. Browning, College of Health and Life Sciences, Aston University, Aston Triangle, Birmingham, B4 7ET, UK