ReSay

This article “ASOBIOTICS 2024: an interdisciplinary symposium on antisense-based programmable RNA antibiotics” is published in

RNA (2025)

Author: Jörg Vogel

Journal: RNA

Year: 2025

Podcast type: Short

Authors:

• Jörg Vogel
• Franziska Faber
• Lars Barquist
• Anke Sparmann
• Linda Popella
• Chandradhish Ghosh

Affiliations:

Jörg Vogel, Franziska Faber, Lars Barquist, Anke Sparmann, Chandradhish Ghosh,Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), D-97080 Würzburg, Germany

Jörg Vogel, Linda Popella,University of Würzburg, Medical Faculty, Institute of Molecular Infection Biology (IMIB), D-97080 Würzburg, Germany

Franziska Faber,University of Würzburg, Medical Faculty, Institute for Hygiene and Microbiology, D-97080 Würzburg, Germany

Lars Barquist,Department of Biology, University of Toronto, Mississauga, Ontario, Canada L5L 1C6

This article "Prior exposure strongly influences mechanisms underpinning survival of heat shock in Escherichia coli" is published in Frontiers in Microbiology.

Author: Muhammad Yasir

Journal: Frontiers in Microbiology

Year: 2025

Podcast type: Scientific (Graduate-Level)

The authors are:

⦁ Muhammad Yasir

⦁ A. Keith Turner

⦁ Sarah Bastkowski

⦁ Caroline S. Jarvis

⦁ Ryan Sweet

⦁ Megan Truong

⦁ Ian G. Charles

⦁ Mark A. Webber

Affiliations:

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Quadram Institute Bioscience, Norwich Research Park, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Centre for Microbial Interaction, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ian G. Charles, Mark A. Webber, Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich, United Kingdom

Megan Truong, Faculty of Science, University of Technology Sydney, Sydney, NSW, Australia

Megan Truong, The University of Sydney, Sydney, NSW, Australia

This article "Prior exposure strongly influences mechanisms underpinning survival of heat shock in Escherichia coli" is published in Frontiers in Microbiology.

Author: Muhammad Yasir

Journal: Frontiers in Microbiology

Year: 2025

Podcast type: Expert

The authors are:

⦁ Muhammad Yasir

⦁ A. Keith Turner

⦁ Sarah Bastkowski

⦁ Caroline S. Jarvis

⦁ Ryan Sweet

⦁ Megan Truong

⦁ Ian G. Charles

⦁ Mark A. Webber

Affiliations:

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Quadram Institute Bioscience, Norwich Research Park, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Centre for Microbial Interaction, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ian G. Charles, Mark A. Webber, Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich, United Kingdom

Megan Truong, Faculty of Science, University of Technology Sydney, Sydney, NSW, Australia

Megan Truong, The University of Sydney, Sydney, NSW, Australia

This article "Prior exposure strongly influences mechanisms underpinning survival of heat shock in Escherichia coli" is published in Frontiers in Microbiology.

Author: Muhammad Yasir

Journal: Frontiers in Microbiology

Year: 2025

Podcast type: Short

The authors are:

⦁ Muhammad Yasir

⦁ A. Keith Turner

⦁ Sarah Bastkowski

⦁ Caroline S. Jarvis

⦁ Ryan Sweet

⦁ Megan Truong

⦁ Ian G. Charles

⦁ Mark A. Webber

Affiliations:

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Quadram Institute Bioscience, Norwich Research Park, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ryan Sweet, Megan Truong, Ian G. Charles, Mark A. Webber, Centre for Microbial Interaction, Norwich, United Kingdom

Muhammad Yasir, A. Keith Turner, Sarah Bastkowski, Caroline S. Jarvis, Ian G. Charles, Mark A. Webber, Norwich Medical School, University of East Anglia, Norwich Research Park, Norwich, United Kingdom

Megan Truong, Faculty of Science, University of Technology Sydney, Sydney, NSW, Australia

Megan Truong, The University of Sydney, Sydney, NSW, Australia

This article "High-throughput transposon mutagenesis in the family Enterobacteriaceae reveals core essential genes and rapid turnover of essentiality" is published in Microbial Genetics.

Author: Fatemeh A. Ghomi

Journal: Microbial Genetics

Year: 2024

Podcast type: Short

The authors are:

⦁ Fatemeh A. Ghomi

⦁ Jakob J. Jung

⦁ Gemma C. Langridge

⦁ Amy K. Cain

⦁ Christine J. Boinett

⦁ Moataz Abd El Ghany

⦁ Derek J. Pickard

⦁ Robert A. Kingsley

⦁ Nicholas R. Thomson

⦁ Julian Parkhill

⦁ Paul P. Gardner

⦁ Lars Barquist

Affiliations:

Fatemeh A. Ghomi, Paul P. Gardner, Department of Biochemistry, University of Otago, Dunedin, New Zealand; Bioinformatics Institute, University of Auckland, Auckland, New Zealand

Jakob J. Jung, Lars Barquist, Institute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany; Helmholtz Institute for RNA-based Infection Research, Helmholtz Centre for Infection Research, Würzburg, Germany

Gemma C. Langridge, Robert A. Kingsley, Quadram Institute Bioscience, Norwich, United Kingdom

Amy K. Cain, Macquarie University, Sydney, Australia

Christine J. Boinett, Derek J. Pickard, Nicholas R. Thomson, Julian Parkhill, Wellcome Sanger Institute, Cambridge, United Kingdom

Moataz Abd El Ghany, Christine J. Boinett, Robert A. Kingsley, Nicholas R. Thomson, Derek J. Pickard, Faculty of Medicine, Imperial College London, London, United Kingdom; King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia

Julian Parkhill, Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom

Lars Barquist, Helmholtz Centre for Infection Research, Würzburg, Germany

This article "Deep learning-guided discovery of an antibiotic targeting Acinetobacter baumannii" is published in Nature Chemical Biology.

Author: Gary Liu

Journal: Nature Chemical Biology

Year: 2023

Podcast type: Short

The authors are:

⦁ Gary Liu

⦁ Denise B. Catacutan

⦁ Khushi Rathod

⦁ Kyle Swanson

⦁ Wengong Jin

⦁ Jody C. Mohammed

⦁ Anush Chiappino-Pepe

⦁ Saad A. Syed

⦁ Kenneth Rachwalski

⦁ Meghan Fragis

⦁ Michael G. Surette

⦁ Brian K. Coombes

⦁ Jakob Magolan

⦁ Tommi Jaakkola

⦁ Regina Barzilay

⦁ James J. Collins

⦁ Jonathan M. Stokes

Affiliations:

Gary Liu, Denise B. Catacutan, Khushi Rathod, Kyle Swanson, Jody C. Mohammed, Kenneth Rachwalski, Meghan Fragis, Brian K. Coombes, Jakob Magolan, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada

Michael G. Surette, Department of Medicine, McMaster University, Hamilton, Ontario, Canada

Tommi Jaakkola, Wengong Jin, Regina Barzilay, Computer Science and Artificial Intelligence Laboratory (CSAIL), Massachusetts Institute of Technology, Cambridge, MA, USA

Anush Chiappino-Pepe, James J. Collins, Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA, USA

Anush Chiappino-Pepe, Swiss Institute of Bioinformatics, Lausanne, Switzerland

James J. Collins, Broad Institute of MIT and Harvard, Cambridge, MA, USA

James J. Collins, Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA

Jonathan M. Stokes, David Braley Centre for Antibiotic Discovery, McMaster University, Hamilton, Ontario, Canada

This article "AI-driven multi-omics integration for multi-scale predictive modeling of genotype-environment-phenotype relationships" is published in Computational and Structural Biotechnology Journal.

Author: You Wu

Journal: Computational and Structural Biotechnology Journal

Year: 2025

Podcast type: Short

The authors are:

⦁ You Wu

⦁ Lei Xie

Affiliations:

You Wu, Lei Xie, Ph.D. Program in Computer Science, The Graduate Center, The City University of New York, New York, NY, USA

Lei Xie, Ph.D. Program in Biology and Biochemistry, The Graduate Center, The City University of New York, New York, NY, USA

Lei Xie, Department of Computer Science, Hunter College, The City University of New York, New York, NY, USA

Lei Xie, Helen & Robert Appel Alzheimer’s Disease Research Institute, Feil Family Brain & Mind Research Institute, Weill Cornell Medicine, Cornell University, New York, NY, USA

This article "Evolution-guided discovery of antibiotics that inhibit peptidoglycan remodelling" is published in Nature.

Author:⁠ Elizabeth J. Culp

Journal: Nature

Year: 2020

Podcast type: Short

The authors are:

⦁ Elizabeth J. Culp

⦁ Nicholas Waglechner

⦁ Wenliang Wang

⦁ Aline A. Fiebig-Comyn

⦁ Yen-Pang Hsu

⦁ Kalinka Koteva

⦁ David Sychantha

⦁ Brian K. Coombes

⦁ Michael S. Van Nieuwenhze

⦁ Yves V. Brun

⦁ Gerard D. Wright

Affiliations:

Elizabeth J. Culp, Nicholas Waglechner, Wenliang Wang, Aline A. Fiebig-Comyn, Kalinka Koteva, David Sychantha, Brian K. Coombes, Gerard D. Wright, M. G. DeGroote Institute for Infectious Disease Research, David Braley Centre for Antibiotic Discovery, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada

Yen-Pang Hsu, Michael S. Van Nieuwenhze, Department of Chemistry, Indiana University, Bloomington, IN, USA

Yves V. Brun, Department of Biology, Indiana University, Bloomington, IN, USA

Yves V. Brun, Département de Microbiologie, Infectiologie et Immunologie, Université de Montréal, Montreal, Quebec, Canada

This article "Dual CRISPRi-seq for genome-wide genetic interaction studies identifies key genes involved in the pneumococcal cell cycle" is published in Cell Systems.

Author: Julien Dénéréaz

Journal: Cell Systems

Year: 2025

Podcast type: Expert

The authors are:

• Julien Dénéréaz
• Elise Eray
• Bimal Jana
• Vincent de Bakker
• Horia Todor
• Tim van Opijnen
• Xue Liu
• Jan-Willem Veening

Affiliations:

Julien Dénéréaz, Elise Eray, Vincent de Bakker, Jan-Willem Veening, Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland

Bimal Jana, Tim van Opijnen, Broad Institute of MIT and Harvard, Cambridge, MA, USA

Bimal Jana, Tim van Opijnen, Division of Infectious Diseases, Department of Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA

Vincent de Bakker, Department of Microbiology, Harvard Medical School, Boston, MA, USA

Horia Todor, Department of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, USA

Xue Liu, Department of Pathogen Biology, International Cancer Center, Shenzhen University Medical School, Shenzhen 518060, China

This article "AI-driven multi-omics modeling of myalgic encephalomyelitis/chronic fatigue syndrome" is published in Nature Medicine.

Author:⁠⁠ Ruoyun Xiong

Journal: Nature Medicine

Year: 2025

Podcast type: Short

The authors are:

⦁ Ruoyun Xiong

⦁ Elizabeth Aiken

⦁ Ryan Caldwell

⦁ Suzanne D. Vernon

⦁ Lina Kozhaya

⦁ Courtney Gunter

⦁ Lucinda Bateman

⦁ Derya Unutmaz

⦁ Julia Oh

Affiliations:

Ruoyun Xiong, Julia Oh, Duke University, Durham, NC, USA

Courtney Gunter, Ruoyun Xiong, The University of Connecticut Health Center, Farmington, CT, USA

Elizabeth Aiken, Ryan Caldwell, Lina Kozhaya, Derya Unutmaz, Julia Oh, The Jackson Laboratory, Farmington, CT, USA

Suzanne D. Vernon, Lucinda Bateman, Bateman Horne Center, Salt Lake City, UT, USA