ReSay

This article "Machine learning analysis of RB-TnSeq fitness data predicts functional gene modules in Pseudomonas putida KT2440" is published in mSystems.

Author:⁠⁠ Andrew J. Borchert

Journal: mSystems

Year: 2024

Podcast type: Short

The authors are:

⦁ Andrew J. Borchert

⦁ Alissa C. Bleem

⦁ Hyun Gyu Lim

⦁ Kevin Rychel

⦁ Keven D. Dooley

⦁ Zoe A. Kellermyer

⦁ Tracy L. Hodges

⦁ Bernhard O. Palsson

⦁ Gregg T. Beckham

Affiliations:

Andrew J. Borchert, Alissa C. Bleem, Keven D. Dooley, Zoe A. Kellermyer, Tracy L. Hodges, Gregg T. Beckham, National Renewable Energy Laboratory, Golden, Colorado, USA

Alissa C. Bleem, Keven D. Dooley, Tracy L. Hodges, Gregg T. Beckham, Renewable and Sustainable Energy Institute, University of Colorado Boulder, Boulder, Colorado, USA

Andrew J. Borchert, Alissa C. Bleem, Gregg T. Beckham, Department of Chemistry, Colorado School of Mines, Golden, Colorado, USA

Hyun Gyu Lim, Kevin Rychel, Bernhard O. Palsson, Department of Bioengineering, University of California San Diego, La Jolla, California, USA

Hyun Gyu Lim, Bernhard O. Palsson, Systems Biology Research Group, University of California San Diego, La Jolla, California, USA

Hyun Gyu Lim, Bernhard O. Palsson, Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark

Bernhard O. Palsson, Hyun Gyu Lim, Bioinformatics Research Center, University of California San Diego, La Jolla, California, USA

This article "From mental power to muscle power—gaining strength by using the mind" is published in Neuropsychologia.

Author:⁠⁠ Vinoth K. Ranganathan

Journal: Neuropsychologia

Year: 2004

Podcast type: Short

The authors are:

⦁ Vinoth K. Ranganathan

⦁ Vlodek Siemionow

⦁ Jing Z. Liu

⦁ Vinod Sahgal

⦁ Guang H. Yue

Affiliations:

Vinoth K. Ranganathan, Vlodek Siemionow, Jing Z. Liu, Guang H. Yue, Department of Biomedical Engineering/ND20, The Lerner Research Institute, The Cleveland Clinic Foundation, 9500 Euclid Avenue, Cleveland, OH 44195, USA

Vlodek Siemionow, Vinod Sahgal, Department of Physical Medicine & Rehabilitation, The Cleveland Clinic Foundation, Cleveland, OH 44195, USA

Guang H. Yue, Orthopedic Research Center, The Cleveland Clinic Foundation, Cleveland, OH 44195, USA

This article "L-theanine suppresses the metastasis of prostate cancer by downregulating MMP9 and Snail" is published in Journal of Nutritional Biochemistry.

Author:⁠⁠ Xirui Fan

Journal: Journal of Nutritional Biochemistry

Year: 2021

Podcast type: Short

The authors are:

⦁ Xirui Fan

⦁ Jinyi Zhou

⦁ Xiaowen Bi

⦁ Juanjuan Liang

⦁ Shuai Lu

⦁ Xintong Yan

⦁ Lan Luo

⦁ Zhimin Yin

Affiliations:

Xirui Fan, Jinyi Zhou, Xiaowen Bi, Juanjuan Liang, Shuai Lu, Xintong Yan, Zhimin Yin, Jiangsu Province Key Laboratory for Molecular and Medical Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, Jiangsu, People’s Republic of China

Lan Luo, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, Jiangsu, People’s Republic of China

This article "Bacteria use a decoy defence to fight viruses" is published in Nature.

Author:⁠⁠ Malcolm F. White

Journal: Nature

Year: 2025

Podcast type: Short

The authors are:

⦁ Malcolm F. White

Affiliations:

Malcolm F. White, School of Biology, University of St Andrews, St Andrews KY16 9ST, UK

This article “Artificial intelligence in metabolic research” is published in Nature Metabolism.

Author:Jens Juul Holst

Journal: Nature Metabolism

Year: 2025

Podcast type: Short

The authors are:

• Jens Juul Holst
• Camilla Schéele
• Philipp E. Scherer
• Weiping Jia
• Eran Segal
• Nikolai Slavov
• Ruth J. F. Loos
• Golnaz Vahedi
• Lei Sun
• M. Madan Babu
• Melissa D. McCradden
• Peter G. Jacobs

Affiliations:

Jens Juul Holst, Camilla Schéele— Department of Biomedical Sciences, University of Copenhagen, Faculty of Health and Medical Sciences, Copenhagen, Denmark; The Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark

Philipp E. Scherer — Touchstone Diabetes Center, The University of Texas Southwestern Medical Center, Dallas, TX, USA

Weiping Jia— Shanghai Key Laboratory of Diabetes Mellitus, Department of Endocrinology and Metabolism, Shanghai Diabetes Institute, Shanghai Clinical Center for Diabetes, Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China; Institute for Proactive Healthcare, Shanghai Jiao Tong University, Shanghai, China

Eran Segal — Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot, Israel; Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, United Arab Emirates

Nikolai Slavov — Department of Bioengineering, Northeastern University, Boston, MA, USA; Parallel Squared Technology Institute, Watertown, MA, USA

Ruth J. F. Loos — Charles Bronfman Institute for Personalized Medicine, Windreich Department of Artificial Intelligence and Human Health, Icahn School of Medicine at Mount Sinai, New York, NY, USA

Golnaz Vahedi — Department of Genetics; Institute for Immunology and Immune Health; Epigenetics Institute; Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA

Lei Sun — TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China; Cardiovascular & Metabolic Disorders, DUKE-NUS Medical School, Singapore, Singapore; State Key Laboratory of Metabolism and Regulation in Complex Organisms, Wuhan University, Wuhan, China

M. Madan Babu — St. Jude Children’s Research Hospital, Memphis, TN, USA

Melissa D. McCradden — Australian Institute for Machine Learning, The University of Adelaide, Adelaide, South Australia, Australia; Women’s and Children’s Health Network, North Adelaide, South Australia, Australia; SickKids Research Institute, Toronto, Ontario, Canada

Peter G. Jacobs — Artificial Intelligence for Medical Systems Lab, Oregon Health & Science University, Portland, OR, USA; School of Chemical, Biological, and Environmental Engineering, College of Engineering, Oregon State University, Corvallis, OR, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA

This article “A generative artificial intelligence approach for the discovery of antimicrobial peptides against multidrug-resistant bacteria” is published in Nature Microbiology.

Author: Yihui Wang

Journal: Nature Microbiology

Year: 2025

Podcast type: Short

The authors are:

• Yihui Wang
• Lanlan Zhao
• Ziyun Li
• Yaxuan Xi
• Yingmiao Pan
• Guoping Zhao
• Lei Zhang

Affiliations:

Yihui Wang, Lanlan Zhao, Ziyun Li, Yaxuan Xi, Yingmiao Pan, Guoping Zhao, Lei Zhang — State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China

Guoping Zhao — CAS Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China

Guoping Zhao — Shanghai Research Center for Brain Science and Brain-Inspired Intelligence, Shanghai, China

Guoping Zhao — Shanghai Institute for Advanced Immunochemical Studies, ShanghaiTech University, Shanghai, China

Lei Zhang — School of Life Sciences, Shandong University, Qingdao, China

This article “The microbiota extends the reproductive lifespan of mice by safeguarding the ovarian reserve” is published in Cell Host & Microbe.

Author: Sarah K. Munyoki

Journal: Cell Host & Microbe

Year: 2025

Podcast type: Short

The authors are:

• Sarah K. Munyoki
• Julie P. Goff
• Amanda Reshke
• Erin Wilderoter
• Nyasha Mafarachisi
• Antonija Kolobaric
• Yi Sheng
• Steven J. Mullett
• Gabrielle E. King
• Jacob D. DeSchepper
• Richard J. Bookser
• Carlos A. Castro
• Stacy L. Gelhaus
• Mayara Grizotte-Lake
• Kathleen E. Morrison
• Anthony J. Zeleznik
• Timothy W. Hand
• Miguel A. Brieño-Enriquez
• Eldin Jašarević

Affiliations:

Sarah K. Munyoki, Julie P. Goff, Amanda Reshke, Erin Wilderoter, Nyasha Mafarachisi, Antonija Kolobaric, Yi Sheng, Carlos A. Castro, Anthony J. Zeleznik, Miguel A. Brieño-Enriquez, Eldin Jašarević — Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA

Sarah K. Munyoki, Julie P. Goff, Amanda Reshke, Erin Wilderoter, Nyasha Mafarachisi, Antonija Kolobaric, Eldin Jašarević — Department of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA

Sarah K. Munyoki, Julie P. Goff, Amanda Reshke, Erin Wilderoter, Nyasha Mafarachisi, Antonija Kolobaric, Yi Sheng, Gabrielle E. King, Carlos A. Castro, Anthony J. Zeleznik, Miguel A. Brieño-Enriquez, Eldin Jašarević — Magee-Womens Research Institute, Pittsburgh, PA, USA

Steven J. Mullett, Stacy L. Gelhaus — Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA

Steven J. Mullett, Stacy L. Gelhaus — Health Sciences Mass Spectrometry Core, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA

Mayara Grizotte-Lake — Taconic Biosciences, Resanssler, NY, USA

Kathleen E. Morrison — Department of Psychology, West Virginia University, Morgantown, WV, USA

Jacob D. DeSchepper, Richard J. Bookser, Timothy W. Hand — University of Pittsburgh Gnotobiotic Animal Core, Office of Research, Health Sciences, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA

Timothy W. Hand — Department of Pediatrics, UPMC Children’s Hospital of Pittsburgh, University of Pittsburgh, Pittsburgh, PA, USA

This article "Nasal Staphylococcus aureus carriage promotes depressive behaviour in mice via sex hormone degradation" is published in Nature Microbiology.

Author: Guoxiu Xiang

Journal: Nature Microbiology

Year: 2025

Podcast type: Short

The authors are:

• Guoxiu Xiang
• Yanan Wang
• Yan Song
• Ping Miao
• Lei He
• Kaiji Ni
• Huoqing Luo
• Qian Liu
• Ying Jian
• Ziyu Yang
• Tianchi Chen
• Ke Xu
• Xia Sun
• Zhen Shen
• Chenfeng Ji
• Na Zhao
• Mengxin He
• Yan Pan
• Yanli Luo
• Ji Hu
• Michael Otto
• Min Li

Affiliations:

Guoxiu Xiang, Yan Song, Ping Miao, Lei He, Kaiji Ni, Qian Liu, Ying Jian, Ziyu Yang, Tianchi Chen, Ke Xu, Zhen Shen, Na Zhao, Min Li, Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Chinese Academy of Sciences, Shanghai, China

Yanan Wang, Lei He, Kaiji Ni, Xia Sun, Chenfeng Ji, Mengxin He, Yan Pan, Institute of Translational Medicine, Shanghai University, Shanghai, China

Huoqing Luo, Ji Hu, Department of Physiology and Pathophysiology, School of Basic Medical Sciences, Fudan University, Shanghai, China

Yanli Luo, Ji Hu, Shanghai Key Laboratory of Brain Functional Genomics, Shanghai Changning-ECNU Mental Health Center, East China Normal University, Shanghai, China

Michael Otto, Pathogen Molecular Genetics Section, Laboratory of Bacteriology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA

Min Li, State Key Laboratory of Microbial Metabolism, Shanghai Jiao Tong University, Shanghai, China

This article "Exercise delays brain aging through muscle-brain crosstalk" is published in Cell Proliferation.

Author: Shirin Pourteymour

Journal: Cell Proliferation

Year: 2025

Podcast type: Short

The authors are:

• Shirin Pourteymour
• Rakesh Kumar Majhi
• Frode A. Norheim
• Christian A. Drevon

Affiliations:

Shirin Pourteymour, Frode A. Norheim, Christian A. Drevon, Department of Nutrition, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway

Rakesh Kumar Majhi, Tissue Restoration Lab, Department of Biological Sciences and Bioengineering, Mehta Family Center for Engineering in Medicine, Indian Institute of Technology Kanpur, Kanpur, India

Rakesh Kumar Majhi, Center of Excellence in Cancer, Gangwal School of Medical Science and Technology, Indian Institute of Technology Kanpur, Kanpur, India

Christian A. Drevon, Vitas Ltd, Oslo, Norway

This article "Dual CRISPRi-seq for genome-wide genetic interaction studies identifies key genes involved in the pneumococcal cell cycle" is published in Cell Systems.

Author: Julien Dénéréaz

Journal: Cell Systems

Year: 2025

Podcast type: Short

The authors are:

• Julien Dénéréaz
• Elise Eray
• Bimal Jana
• Vincent de Bakker
• Horia Todor
• Tim van Opijnen
• Xue Liu
• Jan-Willem Veening

Affiliations:

Julien Dénéréaz, Elise Eray, Vincent de Bakker, Jan-Willem Veening, Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland

Bimal Jana, Tim van Opijnen, Broad Institute of MIT and Harvard, Cambridge, MA, USA

Bimal Jana, Tim van Opijnen, Division of Infectious Diseases, Department of Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA

Vincent de Bakker, Department of Microbiology, Harvard Medical School, Boston, MA, USA

Horia Todor, Department of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, USA

Xue Liu, Department of Pathogen Biology, International Cancer Center, Shenzhen University Medical School, Shenzhen 518060, China