Let's Talk Micro

218: Metagenomics in Clinical Microbiology


Listen Later

In this episode of Let's Talk Micro, we break down metagenomic next-generation sequencing (mNGS) and how it's changing the way we diagnose complex infectious diseases.

I'm joined by Steve Miller, MD, PhD—Chief Medical Officer at Delve Bio—to discuss how unbiased metagenomics moved from research labs into real-world clinical practice.

We cover what metagenomics is, how it differs from targeted PCR and sequencing, and where it adds the most value—especially in meningitis and encephalitis, immunocompromised patients, and cases where routine testing comes back negative.

Dr. Miller shares insights from years of clinical experience, including how mNGS can improve diagnostic yield, shorten time to diagnosis, guide targeted therapy, and reduce unnecessary testing and hospital stays. We also touch on challenges like cost, result interpretation, diagnostic stewardship, and where metagenomics is headed next—including its role in public health and emerging infections.

Links & Resources
  • Clinical metagenomics for meningitis and encephalitis (Nature Medicine) https://www.nature.com/articles/s41591-024-03275-1

Stay connected with Let's Talk Micro:

  • Website: letstalkmicro.com

  • Questions or feedback? Email me at [email protected]

  • Interested in being a guest on Let's Talk Micro? Fill out the form here: https://forms.gle/V2fT3asjfyusmqyi8

Support the podcast:

  • Venmo

  • Buy me a Ko-fi

...more
View all episodesView all episodes
Download on the App Store

Let's Talk MicroBy Luis Plaza

  • 5
  • 5
  • 5
  • 5
  • 5

5

36 ratings


More shows like Let's Talk Micro

View all
My Favorite Murder with Karen Kilgariff and Georgia Hardstark by Exactly Right and iHeartPodcasts

My Favorite Murder with Karen Kilgariff and Georgia Hardstark

172,171 Listeners

NEJM This Week by NEJM Group

NEJM This Week

319 Listeners

This Week in Virology by Vincent Racaniello

This Week in Virology

2,059 Listeners

JAMA Clinical Reviews by JAMA Network

JAMA Clinical Reviews

501 Listeners

The Daily by The New York Times

The Daily

112,952 Listeners

This Podcast Will Kill You by Exactly Right and iHeartPodcasts

This Podcast Will Kill You

16,985 Listeners

Today, Explained by Vox

Today, Explained

10,284 Listeners

Annals On Call Podcast by American College of Physicians

Annals On Call Podcast

197 Listeners

Breakpoints by Society of Infectious Diseases Pharmacists

Breakpoints

169 Listeners

Fiction - Comedy Fiction by The Sunset Explorers

Fiction - Comedy Fiction

6,448 Listeners

Public Health On Call by The Johns Hopkins Bloomberg School of Public Health

Public Health On Call

628 Listeners

The Curious Clinicians by The Curious Clinicians

The Curious Clinicians

371 Listeners

Febrile by Sara Dong

Febrile

186 Listeners

ID:IOTS - Infectious Disease Insight Of Two Specialists by Infectious Disease: Insights of Two Specialists

ID:IOTS - Infectious Disease Insight Of Two Specialists

29 Listeners

Infectious Disease Puscast by Vincent Racaniello

Infectious Disease Puscast

88 Listeners